Freelancer profile translated to English.
Back to original languageAbout Marion
I am a Chemical Engineer with a specialization in Life Sciences. Passionate about large-scale analyses, I completed my PhD in multi-omics data analysis.
I am capable of carrying out proteomic, metabolomic, transcriptomic, and genomic or multi-omics data analysis projects. I have extensive experience in MS, ChIP-seq, and RNA-seq analysis and a strong background in epigenetics and epigenomics.
From your raw data, I can make sense of your results using the analysis pipelines I have developed and then correlating the results with R, Bash, or Python. I remain at your disposal for further information. I would be delighted to help you understand the biological mechanisms at the heart of your areas of interest through a multi-omics approach.
French
Native or bilingual
Can work on-site
Grenoble (up to 10km), Lyon (up to 10km)
Experience
- CEAMulti-omics Data AnalysisBIOTECHOctober 2016 - December 2019 (3 years and 3 months)Grenoble, FranceProteomic analysis of histone post-translational modifications (focus on acetylation and crotonylation) during mouse spermatogenesisMetabolomic analyses of acyl-CoA (substrates of acylations) in mouse testis cellsGenomic analysis (ChIP-seq) of crotonylation in spermatocytes and round spermatids- Implementation of bioinformatics pipelines for quality control, mapping and peak calling of ChIP-seq datasets: Fastqc, Seqtk, Trimmomatic, Bowtie2, Picard tool, Macs2 – Bash programming- Writing of R scripts and usage of bedtools commands in Unix for genomics data analysis- Integration with public ChIP-seq data such as H3K4me1 for enhancers, H3K4me3 for active transcription and transcription factors or regulatorsTranscriptomic analysis of RNA expression in spermatocytes and round spermatidsProgramming with Bash, R and Python (3 years)Biostatistical analysis of genomic and transcriptomic dataThree projects realized in collaboration with research teams
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Education
- PhD in Multi-omics Data AnalysisCEA Grenoble2020
- Specialized Master's in Management of Biotechnology and Pharmaceutical CompaniesGrenoble School of Management2020
Certifications
- Advanced R TrainingUniversity Grenoble Alpes2018